Microscopy Image Annotation for Cell Classification and Segmentation
Annotated microscopy image sequences to classify and segment cells over time using a custom AI pipeline (Cellpose + SAM). The project involved identifying and labeling four categories: circular live cells, fixed cells, dead cells, and abnormal fragments. Each object was segmented, tracked over time, and measured for brightness, area, and count. The output included AVI videos with overlaid masks and a data table for frame-wise analysis. The project required advanced image processing, strong domain knowledge in cell biology, and hands-on work with open-source AI tools.